OmicsFormer Analysis Report
Model Information
Model Type:
AdvancedMultiOmicsTransformer
Device:
cpu
Analysis Summary
Attention Patterns Extracted:
[]
Embeddings Extracted:
['pooled']
Feature Importance Analysis:
['genomics', 'transcriptomics', 'proteomics', 'metabolomics']
Analysis Visualizations
Cll_Embeddings_Pca
Cll_Embeddings_Tsne
Cll_Embeddings_Umap
Cll_Attention_Heatmap
Cll_Cross_Modal_Correlations
Cll_Feature_Importance_Mrna
Cll_Feature_Importance_Methylation
Cll_Feature_Importance_Mutations
Cll_Feature_Importance_Drugs
Cll_Feature_Importance_Mrna
Cll_Feature_Importance_Methylation
Cll_Feature_Importance_Mutations
Cll_Feature_Importance_Drugs
Cll_Top_Biomarkers_Mrna.Csv
Cll_Top_Biomarkers_Methylation.Csv
Cll_Top_Biomarkers_Mutations.Csv
Cll_Top_Biomarkers_Drugs.Csv
Cll_Pathways_Mrna
Cll_Pathways_Methylation
Cll_Pathways_Mutations
Cll_Pathways_Drugs
Cll_Pathway_Enrichment_Mrna.Csv
Cll_Pathway_Enrichment_Methylation.Csv
Cll_Pathway_Enrichment_Mutations.Csv
Cll_Pathway_Enrichment_Drugs.Csv
Cll_Pathways_Mrna
Cll_Pathways_Methylation
Cll_Pathways_Mutations
Cll_Pathway_Enrichment_Mrna.Csv
Cll_Pathway_Enrichment_Methylation.Csv
Cll_Pathway_Enrichment_Mutations.Csv
Cll_Pathway_Enrichment_Drugs.Csv
Cll_Pathways_Mrna
Cll_Pathways_Methylation
Cll_Pathways_Mutations
Cll_Pathway_Enrichment_Mrna.Csv
Cll_Pathway_Enrichment_Methylation.Csv
Cll_Pathway_Enrichment_Mutations.Csv
Cll_Patient_Stratification
Recommendations
Use attention visualizations to understand cross-modal interactions
Analyze feature importance to identify key biomarkers
Use embedding visualizations for sample clustering analysis
Consider correlation analysis for modality relationship insights